Job Description P30136 Confidence 100.00% Date Thu Jan 5 11:45:53 GMT 2012 Rank 1 Aligned Residues 510 % Identity 67% Template c3epmB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:thiamine biosynthesis protein thic; PDBTitle: crystal structure of caulobacter crescentus thic Resolution 2.79 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	G	T	A	F	P	N	S	K	R	I	Y	I	T	G	.	T	H	P	G	V	R	V	P	M	R	E	I	Q	L	S	P	T	L	I	G	G	S	K	E	Q	P	Q	Y	E	E	N	E	A	I	P	V	Y	D	T	S	G	P	Y	G	D	P	Q	I	A	I	N	V	Q	Q	G	L	A	K	L	R	Q	P	W	I
Query Conservation																	.
Alig confidence																	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	G	P	I	P	G	S	R	K	V	Y	Q	A	G	E	L	F	P	E	L	R	V	P	F	R	E	V	A	V	H	P	S	A	.	.	.	.	.	.	.	.	.	.	.	N	E	P	P	V	T	I	Y	D	P	S	G	P	Y	S	D	P	A	I	Q	I	D	I	E	K	G	L	P	R	T	R	E	A	L	V
Template Known Secondary structure				S	S		T	T									S	S	S	T	T												G	G	G	.	.	.	.	.	.	.	.	.	.	.												G	G	G	G		T	T	S				T	T	T		S			T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		D	A	R	G	D	T	E	E	L	T	V	R	S	S	D	Y	T	K	A	R	L	A	D	D	G	L	D	E	L	R	F	S	G	V	L	T	P	K	.	R	A	K	A	G	R	R	V	T	Q	L	H	Y	A	R	Q	G	I	I	T	P	E	M	E	F	I	A	I	R	E	N	M	G	R	E	R	I	R	S	E	V
Query Conservation																																								.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																							.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template Sequence		V	A	R	G	D	V	E	E	V	A	D	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	E	F	P	D	T	G	R	K	I	Y	R	A	K	P	G	K	L	V	T	Q	L	E	Y	A	R	A	G	I	I	T	A	E	X	E	Y	V	A	I	R	E	N	L	R	R	E	Q	D	R	.	.	.
Template Known Secondary structure				T	T						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T								T	T				S							T	T													T	T	T	T			S	S	S	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	Q	H	P	G	M	S	F	G	A	H	L	P	E	N	I	T	A	E	F	V	R	D	E	V	A	A	G	R	A	I	I	P	A	N	I	N	H	P	E	S	E	P	M	I	I	G	R	N	F	L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T
Query Conservation
Alig confidence		.																																																															.	.	.	.	.
Template Conservation		.																																																															.	.	.	.	.
Template Sequence		.	P	C	V	R	D	G	E	D	F	G	A	S	I	P	D	F	V	T	P	E	F	V	R	Q	E	I	A	R	G	R	A	I	I	P	A	N	I	N	H	G	E	L	E	P	X	A	I	G	R	N	F	L	V	K	I	N	A	N	I	G	N	T	.	.	.	.	.	V	A	D	E	V	D	K	L	V	W	A	T
Template Known Secondary structure		.						S			T	T					S	S												T	T	S		B					T	T		T	T						B	S	T	T	S												.	.	.	.	.
Template Predicted Secondary structure		.																																																															.	.	.	.	.
Template SS confidence
			162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	G	A	D	T	V	M	D	L	S	T	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	G	A	D	T	V	X	D	L	S	T	G	R	N	I	H	N	I	R	D	W	I	I	R	N	S	S	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	V	A	E	D	L	N	W	E	V	F	R	D	T	L	I	E	Q	C	E	Q	G	V	D	Y	F	T	I	H	A	G	V	R	L	P	F
Template Known Secondary structure			T	T		S								S	T	T											T		S	S														T	T	T		G	G	G																	T								T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E	I	C	A	A	Y	D	V	S	L	S	L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H	T	L	G	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	X	T	A	K	R	V	T	G	I	V	S	R	G	G	S	I	X	A	K	W	C	L	A	H	H	K	E	N	F	L	Y	E	R	F	D	E	I	C	E	I	X	R	A	Y	D	V	S	F	S	L	G	D	G	L	R	P	G	S	T	A	D	A	N	D	E	A	Q	F	S	E	L	R	T	L	G	E	L	T
Template Known Secondary structure		G	G	G	G	T	T	S	S	S																			S							S									T	T	T	T								T	T			S	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	W	E	Y	D	V	Q	V	M	I	E	G	P	G	H	V	P	M	Q	M	I	R	R	N	M	T	E	E	L	E	H	C	H	E	A	P	F	Y	T	L	G	P	L	T	T	D	I	A	P	G	Y	D	H	F	T	S	G	I	G	A	A	M	I	G	W	F	G	C	A	M	L	C	Y	V	T	P	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	A	W	K	H	G	V	Q	V	X	I	E	G	P	G	H	V	A	X	H	K	I	K	A	N	X	D	E	Q	L	K	H	C	H	E	A	P	F	Y	T	L	G	P	L	T	T	D	I	A	P	G	Y	D	H	I	T	S	A	I	G	A	A	X	I	G	W	F	G	T	A	X	L	C	Y	V	T	P	K	E
Template Known Secondary structure							T	T									S	B			G	G	G												T	T	T									B	S		S	S		T	T																	T		S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	G	L	P	N	K	E	D	V	K	Q	G	L	I	T	Y	K	I	A	A	H	A	A	D	L	A	K	G	H	P	G	A	Q	I	R	D	N	A	M	S	K	A	R	F	E	F	R	W	E	D	Q	F	N	L	A	L	D	P	F	T	A	R	A	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	G	L	P	D	R	D	D	V	K	T	G	V	I	T	Y	K	L	A	A	H	A	A	D	L	A	K	G	H	P	G	A	A	X	W	D	D	A	I	S	R	A	R	F	E	F	R	W	E	D	Q	F	N	L	G	L	D	P	E	T	A	R	K	F	H
Template Known Secondary structure		T	T	S																									T	T		T	T														T	T								T	S	S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.