Return to main results Retrieve Phyre Job Id

Job DescriptionP30136
Confidence80.03%DateThu Jan 5 11:45:53 GMT 2012
Rank28Aligned Residues140
% Identity16%Templatec3d0cB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270. ........280.........290.........300......
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Query Sequence  LVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLS. . . . . . TGRYIHETREWILRNSPVPIGTVPIYQALEKVNGI
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Template Sequence  RATVVAGIG. . . . . YSVDTAIELGKSAIDSGADCVXIHQPVHPYITDAGAVEYYRNIIEALDAPSI. . . . . . . . . . IYFK
Template Known Secondary structure  SS
.....SSTT
S




S


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   7980....... ..90.........100.........110.........120.........130......... 140...
 
   307..310.........320.........330.........340...... ...350.........360........ .370........
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Query Sequence  AEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK. RLTGIVSRGGSIMAKWCLSHHQ. . . . . . . ENFLYQHFRE
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Template Sequence  DAHLSDDVIKELAPLDKLVGIKYAINDIQRVTQVXRAVPKSSNVAFICGTAEKWAPFFYHAGAVGFTSGLVNVFPQKSFA
Template Known Secondary structure 
TTS
TTT
TT



S
GGG

TTT

SGGGT
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   379380.......
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Query Sequence  ICEICAAYD
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Template Sequence  LLEALEEGN
Template Known Secondary structure  T
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   224.....230..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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