Job Description P30136 Confidence 80.03% Date Thu Jan 5 11:45:53 GMT 2012 Rank 28 Aligned Residues 140 % Identity 16% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	L	S	.	.	.	.	.	.	T	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	I
Query Conservation																																									.	.	.	.	.	.
Alig confidence											.	.	.	.	.																										.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	T	V	V	A	G	I	G	.	.	.	.	.	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	.	.	.	.	.	.	.	.	.	.	I	Y	F	K
Template Known Secondary structure		S	S								.	.	.	.	.	S	S														T	T		S										S																		S	S	S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.											140	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																							.	.	.	.	.	.	.
Query SS confidence																																										.																							.	.	.	.	.	.	.
Query Sequence		A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	.	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	.	.	.	.	.	.	.	E	N	F	L	Y	Q	H	F	R	E
Query Conservation																																										.																							.	.	.	.	.	.	.
Alig confidence																																										.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	H	L	S	D	D	V	I	K	E	L	A	P	L	D	K	L	V	G	I	K	Y	A	I	N	D	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	T	A	E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L	V	N	V	F	P	Q	K	S	F	A
Template Known Secondary structure			T	T	S		T							T	T		T	T																					S		G	G	G							T	T												T							S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		379	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	E	I	C	A	A	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	A	L	E	E	G	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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