Job Description P30136 Confidence 70.14% Date Thu Jan 5 11:45:53 GMT 2012 Rank 53 Aligned Residues 78 % Identity 26% Template c3b0vD_ PDB info PDB header:oxidoreductase/rna Chain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna Resolution 3.51 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	L	S	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.			.	.
Template Conservation																							.																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	D	P	K	S	L	A	E	A	A	R	I	G	E	A	F	G	Y	D	E	.	I	N	L	N	L	G	C	P	S	E	K	A	Q	E	G	G	Y	G	A	C	L	L	L	D	L	A	R	V	R	E	I	L	K	A	X	G	E	A	V	R	V	P	V	T	.	.	.	.	.	.	.	.	.	.	V	K	X	R
Template Known Secondary structure			S															T	T		S		.									S							T		G	G	G	G	G	G														T	T		S	S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.
			305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	G	L	E	G	K	E	T	Y	R	G	L	A	Q	S	V	E	A	X	A	E	A	G	V	K	V	F	V	V	H	A
Template Known Secondary structure		S		B	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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