Job Description P30136 Confidence 20.76% Date Thu Jan 5 11:45:53 GMT 2012 Rank 233 Aligned Residues 121 % Identity 18% Template c2yytA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E	I	C	A	A	Y	D	V	S	L	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	T	V	K	Q	A	M	K	G	L	A	R	V	G	A	D	L	V	N	V	H	A	A	G	G	R	R	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	I	E	G	L	D	A	G	T	P	S	G	R
Template Known Secondary structure																T		S						G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	S		T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																																				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.									.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	.	.	.	.	.	.	.	.	H	T	L	G	E	L	T	K	I	A	W	E	Y	D	V	Q	V	M	I	E	G	P	G	H	V	P	M	Q	M	I	R	R	N	M	T	E	E	L	E	H	C	H	E	A	P	F	Y	T	L	G
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		M	R	P	R	C	I	A	V	T	Q	L	T	S	T	D	E	R	M	L	H	E	E	L	W	I	S	R	P	L	V	E	T	V	A	H	Y	A	A	L	A	K	E	S	G	L	D	G	V	V	C	S	A	N	.	.	.	.	.	.	.	.	.	E	A	A	F	I	K	E	R	C	G	A	S	F	L	A	V	T	V
Template Known Secondary structure										S	S		T	T									T	T				S																	T								G	G	.	.	.	.	.	.	.	.	.	G										T	T	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	T	D	I	A	P	G	Y	D	H	F	T	S	G	I	G	A	A	M	I	G	W	F	G	C	A	M	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	R	K	A	R	A	L	G	S	D	Y	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions