Job Description P30136 Confidence 31.41% Date Thu Jan 5 11:45:53 GMT 2012 Rank 175 Aligned Residues 233 % Identity 14% Template c2y5sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. Resolution 1.95 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	.	.	.	.	.	.	.	L	S	T	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																.	.	.																					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.										.
Template Conservation																.	.	.																																											.	.	.	.	.	.	.	.	.	.										.
Template Sequence		R	P	L	V	M	G	I	L	N	A	T	P	A	R	.	.	.	D	D	A	L	R	R	A	E	R	M	I	A	E	G	A	D	L	L	D	I	G	G	E	S	T	R	P	G	A	P	P	V	P	L	D	E	E	L	A	R	V	I	.	.	.	.	.	.	.	.	.	.	P	L	V	E	A	L	R	P	L	.	N
Template Known Secondary structure		S													T	.	.	.	T												T	T		S						S	S			S	T	T															.	.	.	.	.	.	.	.	.	.							G	G	G	.
Template Predicted Secondary structure																.	.	.																																											.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.		.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E	I	C	A	A
Query Conservation
Alig confidence												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	L	S	I	D	T	Y	K	P	.	A	V	M	R	A	A	L	A	A	G	A	D	L	I	N	D	I	W	G	F	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	I	D	A	V	R	D
Template Known Secondary structure		S										.										T		S					T	T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						S	S
Template Predicted Secondary structure												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																							.	.	130	.	.	.	.	.	.
		386	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.				.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																							.	.	.						.	.	.
Query SS confidence							.	.	.	.																																							.	.	.						.	.	.
Query Sequence		Y	D	V	S	L	.	.	.	.	S	L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H	T	L	G	E	L	T	K	I	A	W	E	Y	D	V	.	.	.	Q	V	M	I	E	.	.	.	G	P	G	H	V	P	M	Q	M	I	R	R	N	M	T	E	E	L	E	H	C	H
Query Conservation							.	.	.	.																																							.	.	.						.	.	.
Alig confidence							.	.	.	.																																							.	.	.						.	.	.
Template Conservation
Template Sequence		G	N	S	G	L	C	A	M	H	M	L	G	E	P	Q	T	M	Q	V	G	E	P	D	Y	G	D	V	V	T	D	V	R	D	F	L	A	A	R	A	Q	A	L	R	D	A	G	V	A	A	E	R	I	C	V	D	P	G	F	G	F	G	K	A	V	V	D	D	N	Y	A	L	L	A	A	L	P	D	T	A	P
Template Known Secondary structure		S	S												T	T	T	T								S	S																			T	T			G	G	G							T	T	S	S	S		T	T									T	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
								456	.	.	.	460	.								.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure		.	.	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	A	P	F	Y	T	.	.	.	.	.	.	.	L	G	P	L	T	T	D	I	A	P	G	Y	D	H	F	T	S	G	I	G	A	A	M	I	G	W	F	G	C	A	M	L	C	Y	V	T	P	K	E	H	L	G	L	P	N	K	E	D	V	K	Q	G	L	I	T	Y	K	I	A	A	H
Query Conservation		.	.	.	.	.	.							.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.							.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	P	D	G	R	A	Y	P	I	L	A	G	M	S	R	K	S	M	L	G	A	V	I	G	G	K	P	P	L	E	R	V	A	A	S	V	A	A	A	L	C	A	V	E	R	G	A	A	I	V	.	.	.	.	.	.	.	.	.	.	.	.	R	V	H	D	V	A	A	T	V	D	A	L	S	V	W	N	A
Template Known Secondary structure		B		T	T	S	S	B			B					T	T						T	T	T	T	S			G	G	G															T	T		S			.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.													.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		523	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	L	A	K	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	A	A	A	R	Q	R
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions