Return to main results Retrieve Phyre Job Id

Job DescriptionP30136
Confidence52.49%DateThu Jan 5 11:45:53 GMT 2012
Rank108Aligned Residues116
% Identity25%Templatec2x5eA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:upf0271 protein pa4511; PDBTitle: crystal structure of the hypothetical protein pa4511 from2 pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280....... ..290.........300.........310.........320.. .... ...330.........340
Predicted Secondary structure 



..











........
..

Query SS confidence 














. .


































. . . . . . . .



. .













Query Sequence  GRYIHETREWILRNS. . PVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQ. . . . . . . . AEQG. . VDYFTIHAGVLLRY
Query Conservation 



  

  

  
..











     
    

 
     

 
........
  
..


 


 

    
Alig confidence 














..


































........



..













Template Conservation 



  
  

 

   

 








  




 
  
  

   
 





   
   
  
 









  
Template Sequence  AGDPLTMRRAVELAVRHGVSIGAHPAYPDLSGFGRRSLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKPHGALYNDL
Template Known Secondary structure  S

TT



S
TTTTT
S




TT






Template Predicted Secondary structure 




























Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.........110.........120....
 
   341........350.........360.........370.........380.........390.. .......400.........410.........
Predicted Secondary structure 














.













Query SS confidence 



















































.


























Query Sequence  VPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL. GDGLRPGSIQDANDEAQFAELHTLGEL
Query Conservation        
  








 
 


    




  

 



   






.






 
 

 
 

 


 




Alig confidence 



.............................


















.







.................

Template Conservation    
 .............................  
 

  

   
  
 
  

    
.................  
Template Sequence  VGDD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELLRAVLDACAAYRKGLPLMVLALADNG. . . . . . . . . . . . . . . . . RE
Template Known Secondary structure  TT
.............................
TT



S

.................
Template Predicted Secondary structure 

.............................









.................
Template SS confidence 















































































   125... .130.........140.........150...... ..
 
   420.........430....
Predicted Secondary structure 


Query SS confidence 














Query Sequence  TKIAWEYDVQVMIEG
Query Conservation    

 
 







Alig confidence 














Template Conservation     
   

    
 
Template Sequence  LELADEADVPLLFEA
Template Known Secondary structure  T

Template Predicted Secondary structure 



Template SS confidence 














   159160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions