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Job DescriptionP30136
Confidence36.64%DateThu Jan 5 11:45:53 GMT 2012
Rank157Aligned Residues137
% Identity15%Templatec2on3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:ornithine decarboxylase; PDBTitle: a structural insight into the inhibition of human and2 leishmania donovani ornithine decarboxylases by 3-aminooxy-3 1-aminopropane
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  EKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIH
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Template Sequence  SQIKYAANNGVQMM. . . . TFDSEVELMKVARAHPKAKLVL. . . . . . . . RIATVKFGATLRTSRLLLERAKELNIDVVGVS
Template Known Secondary structure  TTT

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   118.120.........130. ........140.........150... ......160.........170.........180.....
 
   334.....340.........350.........360.........370........ .380......... 390.........400...
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Query Sequence  AGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFRE. . . . . . . ICEICAAYDVS. . . LSLGDGLRPGSIQD
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Template Sequence  F. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGF. PGSEDV
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   196 ...200.........210.........220.........230........ .240....
 
   404.....410.........420.........430...
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Query Sequence  ANDEAQFAELHTLGELTKIAWEYDVQVMIE
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Template Sequence  KLKFEEITGVINPALDKYFPSDSGVRIIAE
Template Known Secondary structure  SS
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GGG


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   245....250.........260.........270....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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