Job Description P30136 Confidence 24.71% Date Thu Jan 5 11:45:53 GMT 2012 Rank 206 Aligned Residues 135 % Identity 21% Template c2o56D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium Resolution 2.00 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	I	Y	Q	A	L	E	K	V	N	G	I	A	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	L	Y	K	M	L	G	G	K	S	R	E	K	I	R	T	Y	A	S	Q	L	Q	F	G	W	G	D	G	S	D	K	D	M	L	T	E	P	E	Q	Y	A	Q	A	A	L	T	A	V	S	E	G	Y	D	A	I	K	V	D	T	V	A	M	D	R	H	G	N	W	N	Q	Q	N	L	N	G	P	L	T	D
Template Known Secondary structure			B					T	T			S		S									G	G	G			S	T	T		T	T					S														T	T		S							S	S	B		T	T	S		B	S		S				S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																			.	.	.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		R	Y	V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	M	A	K	W	C	L	S	H	H	.	.	.	.	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E	I	C	A	A	Y	D	V	S	L	S	L	G	D	G	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		K	I	L	R	L	G	Y	D	R	M	A	A	I	R	D	A	V	G	P	D	V	D	I	I	A	E	M	H	A	F	T	D	T	T	S	A	I	Q	F	G	R	M	I	E	E	L	G	I	F	Y	Y	E	E	P	V	M	P	L	N	P	A	Q	M	K	Q	V	A	D	K	V	N	I	P	L	A	A	G	E	R	I
Template Known Secondary structure																				T	T	S							T	T		S													G	G	G								S	S		S	S	S													S						T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																				.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	T	K	I	A	W	E	Y	D	V	Q	V	M	I	E	G	P	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	W	R	W	G	Y	R	P	F	L	E	N	G	S	L	S	V	I	Q	P	D	I	C	T	C	G	G	I	T	E	V	K	K	I	C	D	M	A	H	V	Y	D	K	T	V	Q	I	H	V	C	G
Template Known Secondary structure		.	.	.	.	.	.	.	.												T	T			S						T	T	T	T	T														T	T	T									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions