 |
Job Description | P30136 | Confidence | 47.05% | Date | Thu Jan 5 11:45:53 GMT 2012 |
Rank | 121 | Aligned Residues | 64 |
% Identity | 19% | Template | c2h9aA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:carbon monoxide dehydrogenase corrinoid/iron- |
PDBTitle: corrinoid iron-sulfur protein
|
Resolution | 1.90 Å |
|
 |
  |   |
374 | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | H | F | R | E | I | C | E | I | C | A | A | Y | D | V | S | L | S | L | G | D | G | L | R | P | G | S | I | Q | D | A | N | D | E | A | Q | F | A | E | L | H | T | L | G | E | L | T | K | I | A | W | E | Y | D | V | Q | V | M | I | E | G | P | G | H | V | P | M | Q | M | I | R | R | N | M | T | E | E | L | E | H |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
|
|
|   |
|   |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   | . | . | . | . | . | . |
|
|   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|
Template Sequence |   |
D | N | Y | E | Q | M | V | E | L | A | K | K | Y | N | V | P | L | T | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | K | G | L | D | A | . |
. |
. |
. |
. |
. |
L | A | E | L | V | Q | K | I | T | A | L | G | Y | K | N | L | I | L | D | P | Q | P | E | N | I | S | E | G | L | F | Y | Q | T | Q | I | R | R | L |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |
| S | S |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 210 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|