Return to main results Retrieve Phyre Job Id

Job DescriptionP30136
Confidence50.25%DateThu Jan 5 11:45:53 GMT 2012
Rank113Aligned Residues108
% Identity18%Templatec1xuzA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250.........260.........270.........280.........290.....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  ANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVP
Query Conservation   
  
    
  

   










     
  



   
   













  

  

  








Alig confidence 

























.





























..




















Template Conservation         
    

      





. 

 


  
  

  
  









 ..                     
Template Sequence  QNNNEFKIGNRSVGYNHEPLIICEIG. INHEGSLKTAFEMVDAAYNAGAEVVKHQTH. . IVEDEMSDEAKQVIPGNADVS
Template Known Secondary structure 



TTTTS

.TTTTT
T
S
..


GGGGG


TT
SS
Template Predicted Secondary structure 












.









..















Template SS confidence 















































































   2.......10.........20....... ..30.........40.........50....... ..60.........70........
 
   296...300.........310.........320.........330.
Predicted Secondary structure 







Query SS confidence 



































Query Sequence  IYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFT
Query Conservation 



     
    

 
     

 

  



 
Alig confidence 








.....





















Template Conservation          
.....
  
    
       

 
 
Template Sequence  IYEIMERCA. . . . . LNEEDEIKLKEYVESKGMIFIS
Template Known Secondary structure 
.....

TT
Template Predicted Secondary structure 
.....




Template SS confidence 



































   7980....... ..90.........100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions