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Job DescriptionP30136
Confidence43.13%DateThu Jan 5 11:45:53 GMT 2012
Rank137Aligned Residues196
% Identity17%Templatec1vbhA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260....... ..270.........280.........290.........300.....
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Query Sequence  LVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTV. . . . . . . MDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNG
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Template Sequence  KLKVLANADTPDD. . . . . . . . . . ALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIM. . . . . . . . . APTLELRQQALD
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SGGGGTTT
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   536...540........ .550.........560.........570.........580.... .....590......
 
   306...310.........320.........330.........340...... ...350.........360.........370...
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Query Sequence  IAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK. . . . RLTGIVSRGGSIMAKWCLSHHQENFLY. . . . . . . .
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Template Sequence  RLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLG
Template Known Secondary structure  TTTS


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GGGGS

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GGGSS
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   597..600.........610.........620.........630.........640.........650.........660.........670......
 
   374.....380...... ...390.........400.........410.........420....... ..430..
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Query Sequence  . . . . . . . . QHFREICEICAAY. . . . . DVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYD. . . . . . . . VQVMI
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Template Sequence  ISYPELTEMQARAIFEAAIAMTNQGVQVFPEI. . . . . . . MVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMI
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   677..680.........690.........700........ .710.........720.........730.........740.........
 
   433......440.........450.........460...
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Query Sequence  EGPGHVPMQMIRRNMTEELEHCHEAPFYTLG
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Template Sequence  EIP. . . . . . . . . RAALVADEIAEQAEFFSFG
Template Known Secondary structure 
S.........TTTT
S
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   750.. .......760.........770.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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