Job Description P30136 Confidence 43.13% Date Thu Jan 5 11:45:53 GMT 2012 Rank 137 Aligned Residues 196 % Identity 17% Template c1vbhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize Resolution 2.30 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	.	.	.	.	.	.	.	M	D	L	S	T	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		K	L	K	V	L	A	N	A	D	T	P	D	D	.	.	.	.	.	.	.	.	.	.	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E	H	M	F	F	A	S	D	E	R	I	K	A	V	R	Q	M	I	M	.	.	.	.	.	.	.	.	.	A	P	T	L	E	L	R	Q	Q	A	L	D
Template Known Secondary structure			S								S				.	.	.	.	.	.	.	.	.	.							T	T			S						G	G	G	G	T	T	T														.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.											.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.										.	.	.	.	.	590	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																											.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	.	.	.	.	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	E	N	F	L	Y	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	L	P	Y	Q	R	S	D	F	E	G	I	F	R	A	M	D	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C	A	E	T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G
Template Known Secondary structure																		T	T	T	S									S		G	G	G	G	S			S																														S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
										374	.	.	.	.	.	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.									.	.	430	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.														.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	H	F	R	E	I	C	E	I	C	A	A	Y	.	.	.	.	.	D	V	S	L	S	L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H	T	L	G	E	L	T	K	I	A	W	E	Y	D	.	.	.	.	.	.	.	.	V	Q	V	M	I
Query Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.							.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		I	S	Y	P	E	L	T	E	M	Q	A	R	A	I	F	E	A	A	I	A	M	T	N	Q	G	V	Q	V	F	P	E	I	.	.	.	.	.	.	.	M	V	P	L	V	G	T	P	Q	E	L	G	H	Q	V	T	L	I	R	Q	V	A	E	K	V	F	A	N	V	G	K	T	I	G	Y	K	V	G	T	M	I
Template Known Secondary structure																								T	T	T								.	.	.	.	.	.	.				S			S																						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.								.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	P	G	H	V	P	M	Q	M	I	R	R	N	M	T	E	E	L	E	H	C	H	E	A	P	F	Y	T	L	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.
Template Sequence		E	I	P	.	.	.	.	.	.	.	.	.	R	A	A	L	V	A	D	E	I	A	E	Q	A	E	F	F	S	F	G
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.					T					T	T	T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Template SS confidence
		750	.	.										.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions