Job Description P30136 Confidence 26.17% Date Thu Jan 5 11:45:53 GMT 2012 Rank 201 Aligned Residues 84 % Identity 20% Template c1djnB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	L	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		I	A	T	R	F	G	V	D	T	V	Y	G	P	G	Q	I	E	A	E	V	D	G	Q	K	F	V	E	M	A	D	S	L	V	D	M	W	.	D	I	T	I	G	D	I	A	E	W	G	E	D	A	G	P	S	R	F	Y	Q	Q	G	H	T	I	P	W	V	K	L	V	K	Q	V	S	K	K	P	V	L	G	V
Template Known Secondary structure											S	S		T	T	S			T	T	T										T	T	T		S			.					S		S	T	T	G	G	G	T	S			T	T	T			T	T	T	T									T	T		S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		P	I	Y	Q	A	L	E	K	V	N	G	I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	.	V	D	Y	F	T	I
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	R	Y	T	D	.	.	.	.	.	.	P	E	K	M	I	E	I	V	T	K	G	Y	A	D	I	I	G	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S					.	.	.	.	.	.										T	T	S		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template SS confidence
												298	.	300	.	.							.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions