Job Description P33232 Confidence 26.08% Date Thu Jan 5 11:51:32 GMT 2012 Rank 452 Aligned Residues 172 % Identity 12% Template c3sqsA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12 Resolution 1.90 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	.	.	.	.	.	.	.	.	.	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																														.
Template Sequence		P	V	Y	Y	S	K	L	Y	A	D	S	I	P	A	M	Q	A	E	A	E	E	A	Q	K	H	G	Y	Q	G	Y	K	T	R	F	G	Y	G	P	K	D	G	P	A	G	M	R	E	N	L	K	R	V	E	A	L	R	E	V	L	G	.	Y	D	V	D	L	M	L	E	C	Y	M	G	W	N	L	D	Y	T	K
Template Known Secondary structure										B															T	T	T		S										G	G	G																					.	S	S	S							T	T		S
Template Predicted Secondary structure																																																														.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.
Predicted Secondary structure																																																												.																.
Query SS confidence																																																												.																.
Query Sequence		D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	.	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	.	A	D	G	I	V
Query Conservation																																																												.																.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.					.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		R	M	L	P	K	L	E	R	F	E	P	R	W	L	E	E	P	V	I	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	A	G	Y	A	E	L	N	A	M	G	I	V	P	I	S	G	G	E	H	E	F	S	V	M	G	C	A	E	L	I	N	R	K	A	V	S	V	L	.
Template Known Secondary structure								G	G	G			S						S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S	S						T	T			S										T	T			S			.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		V	S	N	H	G	G	R	Q	L	D	.	.	.	.	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A
Query Conservation												.	.	.	.
Alig confidence		.	.	.	.	.	.	.				.	.	.	.																	.	.
Template Conservation		.	.	.	.	.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	.	Q	Y	D	T	N	R	V	G	G	I	T	A	A	Q	K	I	N	A	I	A	E	A	A	.	.	Q	I	I	V	I	P	H	A	G	Q	M	H	N	Y	H	L	T	M	A	N	M	N	C	P
Template Known Secondary structure		.	.	.	.	.	.	.								T																.	.	T						S	S		S									T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																								.	.
Template SS confidence
									310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions