452 c3sqsA_ Probab=26.08   E-value=41  Score=13.61  Aligned_columns=172  Identities=12%

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC---------CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             7044100357878899999976654982898605---------6553487846764101223222111111133437887
Q batch____       123 PMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTV---------DMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAW  193 (396)
Q Consensus       123 ~~~fqly~~~d~~~~~~li~~a~~~G~~al~~tv---------D~~~~g~r~~d~~~~~~~~~~~~~~~~~~~~~p~~~~  193 (396)
                      +.........+.+.....++++...||+.+-+-+         |....-.+-+.++..+. +......-.++.-.+..+.
T Consensus       143 ~~y~~~~~~~~~e~~~~~~~~~~~~Gf~~~KiKvG~~~~~~~~~~~~d~~~i~air~~~g-~~~~l~vDaN~~~~~~~A~  221 (386)
T c3sqsA_         143 PVYYSKLYADSIPAMQAEAEEAQKHGYQGYKTRFGYGPKDGPAGMRENLKRVEALREVLG-YDVDLMLECYMGWNLDYTK  221 (386)
T ss_dssp             EEEEECCCBCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC-SSSEEEEECTTCSCHHHHH
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHH
T ss_conf             154542577898999999999986598799980356786543698999999999999759-9978999558888999999


Q ss_pred             HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE-ECCCHHHHHHHHHCC-CCEEE
Q ss_conf             7530134213333443025777715677787630454569899999987379848997-079999999999769-98999
Q batch____       194 DVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIK-GILDPEDARDAVRFG-ADGIV  271 (396)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~~~~~PvivK-gi~~~eda~~a~~~G-vd~I~  271 (396)
                      .....-......-+++..+..                  +|+.+++|++..++||.+- .+.+.+|...+++.| +|.+ 
T Consensus       222 ~~~~~L~~~~i~~iEeP~~~~------------------d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~i~~~~~d~i-  282 (386)
T c3sqsA_         222 RMLPKLERFEPRWLEEPVIAD------------------DVAGYAELNAMGIVPISGGEHEFSVMGCAELINRKAVSVL-  282 (386)
T ss_dssp             HHHHHHGGGCCSEEECCSCTT------------------CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEE-
T ss_pred             HHHHHHHHCCCEEEECCCCCC------------------CHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCEE-
T ss_conf             999985445626996357806------------------9899999998629909808764889999999973899699-


Q ss_pred             ECCCCCCCCC----CCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf             8778888766----545779999999996178977999668789999999997177
Q batch____       272 VSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGA  323 (396)
Q Consensus       272 VsnhGGr~ld----~~~~t~~~L~~i~~av~~~v~Ii~dGGIr~G~DV~KaLALGA  323 (396)
                             |+|    +++.....+.++++..  .+++..-++.-.+...+-++.+.+
T Consensus       283 -------~~d~~~~GGit~~~~i~~~A~~~--gi~~~~h~~~~~~i~laaa~~~~~  329 (386)
T c3sqsA_         283 -------QYDTNRVGGITAAQKINAIAEAA--QIIVIPHAGQMHNYHLTMANMNCP  329 (386)
T ss_dssp             -------CCCHHHHTCHHHHHHHHHHHHHH--TCEECCSSCSHHHHHHHHTCTTCC
T ss_pred             -------EECCCCCCCHHHHHHHHHHHHHC--CCEEEECCCHHHHHHHHHHHHHHH
T ss_conf             -------50404248679999999999981--990996361467899999976532