 |
Job Description | P0AB52 | Confidence | 22.61% | Date | Thu Jan 5 11:14:39 GMT 2012 |
Rank | 58 | Aligned Residues | 66 |
% Identity | 20% | Template | c3rpeA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:modulator of drug activity b; |
PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92.
|
Resolution | 1.10 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | K | I | V | I | V | A | N | G | A | P | Y | G | S | E | S | L | F | N | S | L | R | L | A | I | A | L | R | E | . |
. |
Q | E | S | N | L | D | L | R | L | F | L | M | S | D | A | V | T | A | G | L | R | G | Q | K | P | G | E | G | Y | N | I | Q | Q | M | L | E | I | L | T | A | Q | N | V | P | V | K | L | C |
Query Conservation |   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |   | . | . |   |
|   |   |   |   |
|   |
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
Template Sequence |   |
M | S | N | V | L | I | I | N | A | M | K | E | F | A | H | S | K | G | A | L | N | L | T | L | T | N | V | A | A | D | F | L | R | E | S | G | H | Q | V | K | I | T | T | V | D | Q | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | D | I | E | S | E | I | E | N | Y | L | W | A | D | T | I | I | Y | Q | M |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
| B | T | T | B |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | G | G | G |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
  |   |
79 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
K |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
P |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
68 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|