Return to main results Retrieve Phyre Job Id

Job DescriptionP06709
Confidence94.87%DateThu Jan 5 10:59:19 GMT 2012
Rank158Aligned Residues53
% Identity13%Templated3broa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.04

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.........30.........40.........50......
Predicted Secondary structure 

..














Query SS confidence 











. .








































Query Sequence  NTVPLKLIALLA. . NGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGK
Query Conservation        

  
 .. 
   

  

  




 



 
  
   
  
 
    
Alig confidence 











..








































Template Conservation 
  
  

  
        
  


  
     


  
  
   
 
 
     
Template Sequence  TGTQXTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRXEIKKLLYRKVSGK
Template Known Secondary structure 
TTTS

BT

TTS
SS
Template Predicted Secondary structure 

















Template SS confidence 






















































   30.........40.........50.........60.........70.........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions