Return to main results Retrieve Phyre Job Id

Job DescriptionP06709
Confidence93.02%DateThu Jan 5 10:59:19 GMT 2012
Rank208Aligned Residues63
% Identity21%Templated1tw3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Plant O-methyltransferase, N-terminal domain
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 























Query SS confidence 
































































Query Sequence  VPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAK
Query Conservation      

  
  
   

  

  




 



 
  
   
  
 
    

 
      
   
Alig confidence 











.




































.













Template Conservation 
 
 


 
  
.
 
  


   
     
 



 
   

  
    . 
 

  
  
  
Template Sequence  ATLRLVDHILAG. ARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPG. EFVPTEVGELLADD
Template Known Secondary structure  TTTT.

BT

TTSTT.
TTGGGGSTT
Template Predicted Secondary structure 






.













.


Template SS confidence 
































































   35....40...... ...50.........60.........70.........80... ......90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions