Job Description P06709 Confidence 93.56% Date Thu Jan 5 10:59:19 GMT 2012 Rank 193 Aligned Residues 65 % Identity 15% Template d1t6sa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like Resolution 1.95

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure					.	.												.																.	.																	.	.	.	.	.	.
Query SS confidence					.	.												.																.	.																	.	.	.	.	.	.
Query Sequence		M	K	D	.	.	N	T	V	P	L	K	L	I	A	L	L	.	A	N	G	E	F	H	S	G	E	Q	L	G	E	T	L	.	.	G	M	S	R	A	A	I	N	K	H	I	Q	T	L	R	D	.	.	.	.	.	.	W	G	V	D	V	F	T	V	P	G	K	G	Y	S	L	P	E	P	I	Q	L
Query Conservation					.	.												.																.	.																	.	.	.	.	.	.
Alig confidence					.	.												.																.	.																	.	.	.	.	.	.									.
Template Conservation																																																																		.
Template Sequence		M	Q	E	Q	R	Q	Q	L	L	R	S	L	E	A	L	I	F	S	S	E	E	P	V	N	L	Q	T	L	S	Q	I	T	A	H	K	F	T	P	S	E	L	Q	E	A	V	D	E	L	N	R	D	Y	E	A	T	G	R	T	F	R	I	H	A	I	.	A	G	G	Y	R	F	L	T	E	P	E	F
Template Known Secondary structure																					S	S		B									T	T																							T		S							.	T	T								G	G	G
Template Predicted Secondary structure																																																																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions