Return to main results Retrieve Phyre Job Id

Job DescriptionP06709
Confidence97.40%DateThu Jan 5 10:59:19 GMT 2012
Rank47Aligned Residues59
% Identity19%Templated1r1ua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50....... ..60...
Predicted Secondary structure 

















..


Query SS confidence 





















































. .





Query Sequence  NTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKG. . YSLPEP
Query Conservation        

  
  
   

  

  




 



 
  
   
  
 
    
..
 
   
Alig confidence 














.





































..





Template Conservation     

 

  
    .  
 


  
 

 



 

  
  



   
 
    
 
   
Template Sequence  DYNRIRIMELLSVSE. ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDI
Template Known Secondary structure  S

.B
T

TTSTTSS
Template Predicted Secondary structure 



.










Template SS confidence 





























































   25....30......... 40.........50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions