Job Description P06709 Confidence 90.54% Date Thu Jan 5 10:59:19 GMT 2012 Rank 248 Aligned Residues 50 % Identity 22% Template c3swnC_ PDB info PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

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		271	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure												.																							.	.	.	.	.
Query SS confidence												.																							.	.	.	.	.
Query Sequence		F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	.	.	.	.	.	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation												.																							.	.	.	.	.
Alig confidence												.																							.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	D	Q	R	I	Q	A	T	F	T	G	G	R	Q	I	T	G	I	L	K	G	F	D	Q	L	M	N	L	V	L	D	D	V	E	E	Q	L	R	L	T	G	A	I	R	K	L	G	L	V	V	V	R	G	T	T
Template Known Secondary structure		S	T	T	S							T	T	S												T	T																S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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