Job Description P06709 Confidence 85.31% Date Thu Jan 5 10:59:19 GMT 2012 Rank 303 Aligned Residues 50 % Identity 18% Template c3swnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		271	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure												.																							.	.	.	.	.
Query SS confidence												.																							.	.	.	.	.
Query Sequence		F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	.	.	.	.	.	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation												.																							.	.	.	.	.
Alig confidence												.																							.	.	.	.	.
Template Conservation
Template Sequence		C	I	G	S	N	L	W	V	I	M	K	S	E	R	E	F	A	G	T	L	V	G	F	D	D	Y	V	N	I	V	L	K	D	V	T	E	Y	D	T	V	T	G	V	T	E	K	H	S	E	M	L	L	N	G	N	G
Template Known Secondary structure		T	T	T	S							S	S	S												T	T													S	S	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions