Job Description P06709 Confidence 76.63% Date Thu Jan 5 10:59:19 GMT 2012 Rank 340 Aligned Residues 50 % Identity 6% Template c3cw1D_ PDB info PDB header:splicing Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp Resolution 5.49 Å

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		271	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure												.																							.	.	.	.
Query SS confidence												.																							.	.	.	.
Query Sequence		F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	.	.	.	.	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation												.																							.	.	.	.
Alig confidence												.																							.	.	.	.
Template Conservation
Template Sequence		A	E	G	H	I	V	T	C	E	T	N	T	G	E	V	Y	R	G	K	L	I	E	A	E	D	N	M	N	C	Q	M	S	N	I	T	V	T	Y	R	D	G	R	V	A	Q	L	E	Q	V	Y	I	R	G	C	K
Template Known Secondary structure		S	S	S	S							T	T													T	T	S						S						S	S	S						S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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