Job Description P06709 Confidence 81.42% Date Thu Jan 5 10:59:19 GMT 2012 Rank 322 Aligned Residues 53 % Identity 15% Template c3bw1A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm3; PDBTitle: crystal structure of homomeric yeast lsm3 exhibiting novel octameric2 ring organisation Resolution 2.50 Å

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		268	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.												.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure															.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	N	F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	D	G	I	I	.	.	.	.	.	.	.	.	.	.	.	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation															.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	N	L	D	E	R	V	Y	I	K	L	R	G	A	R	T	L	V	G	T	L	Q	A	F	D	S	H	C	N	I	V	L	S	D	A	V	E	T	I	Y	Q	L	N	N	E	E	L	S	E	S	E	R	R	C	E	M	V	F	I	R	G	D	T
Template Known Secondary structure			G	G	G	T	T	S							G	G	G												T	T																S	T	T																G	G	G
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions