Job Description P06709 Confidence 100.00% Date Thu Jan 5 10:59:19 GMT 2012 Rank 5 Aligned Residues 211 % Identity 12% Template c3bfmA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:biotin protein ligase-like protein of unknown function; PDBTitle: crystal structure of a biotin protein ligase-like protein of unknown2 function (tm1040_0394) from silicibacter sp. tm1040 at 1.70 a3 resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		S	G	D	A	C	I	A	E	Y	Q	Q	A	G	R	G	R	R	G	R	K	W	F	S	P	F	G	A	N	L	Y	L	S	M	F	W	R	L	E	Q	G	P	A	A	A	I	G	L	S	L	V	I	G	I	V	M	A	E	V	L	R	K	L	G	.	.	A	D	K	V	R	V	K	W	P	N	D	L	Y	L	Q
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		Q	D	P	F	D	L	A	C	Q	K	A	E	L	G	V	D	A	G	L	V	V	Y	E	L	G	T	D	V	L	R	A	A	L	V	L	A	P	E	V	P	L	A	K	A	X	A	X	L	P	V	C	G	V	G	F	Q	N	A	L	G	A	L	A	P	P	E	V	A	V	H	L	D	W	N	G	A	L	R	I	N
Template Known Secondary structure														T	T			T	T								S	S											S	S						T	T																	S		T	T							T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		D	R	K	L	A	G	I	L	V	E	L	T	G	K	T	G	D	A	A	Q	I	V	I	G	A	G	I	N	M	A	M	R	R	V	E	E	S	V	V	N	Q	.	G	W	I	T	L	Q	E	A	G	I	N	L	D	R	N	T	L	A	A	M	L	I	R	E	L	R	A	A	L	E	L	F	E	Q	E	G	L	A
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		G	A	R	C	G	R	L	R	I	A	A	S	T	D	D	P	D	T	Q	P	D	W	L	V	V	G	L	D	L	P	L	W	P	E	G	D	G	G	E	T	P	D	E	T	A	L	Y	A	E	G	C	A	D	V	A	A	P	R	L	L	E	S	W	A	R	H	C	L	H	W	I	N	R	W	D	E	G	E	L	E
Template Known Secondary structure		T											S				T	T	S			S										S	S				S	S						S			G	G	G	T	T		T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	L	S	R	W	E	K	L	D	N	F	I	N	R	P	V	K	L	I	I	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		T	I	H	G	E	W	R	G	L	A	H	G	X	G	E	A	R	T	E	.	.	.	.	A	G	R	S	G	T	F	L	G	V	D	E	D	F	G	X	L	L	R	D	E	T	T	T	H	L	I	P	L	T	T	V	L	V	Q
Template Known Secondary structure											B	T	T	T	T	S					.	.	.	.	T	T										T	T								S	S							G	G	G	G	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions