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Job Description | P06709 | Confidence | 90.33% | Date | Thu Jan 5 10:59:19 GMT 2012 |
Rank | 249 | Aligned Residues | 113 |
% Identity | 13% | Template | c2k27A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:paired box protein pax-8; |
PDBTitle: solution structure of human pax8 paired box domain
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Resolution | UNK |
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Predicted Secondary structure |   |
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Query Sequence |   |
N | T | V | P | L | K | L | I | A | L | L | A | N | G | E | F | H | S | G | E | Q | L | G | E | T | L | G | M | S | R | A | A | I | N | K | H | I | Q | T | L | R | D | W | G | V | D | V | F | T | V | P | G | K | G | . |
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Y | S | L | P | E | P | I | Q | L | L | N | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | V | R | Q | R | I | V | D | L | A | H | Q | G | . |
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V | R | P | C | D | I | S | R | Q | L | R | V | S | H | G | C | V | S | K | I | L | G | R | Y | Y | E | T | G | . |
S | I | R | P | G | V | I | G | G | S | K | P | K | V | A | T | P | K | V | V | E | K | I | G | D | Y | K | R | Q | N | P | T | M | F | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | Q | I | L | G | Q | L | D | G | G | S | V | A | V | L | P | V | I | D | S | T | N | Q | Y | L | L | D | R | I | G | E | L | K | S | G | D | A | C | I | A | E | Y | Q | Q | A | G | R | G | R | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
W | E | I | R | D | R | L | L | A | E | G | V | C | D | N | D | T | V | P | S | V | S | S | I | N | R | I | I | R | T | K | V | Q | Q | P | F | N | L | P | M | D | S | G | A | P | G | G | G | S | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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