Return to main results Retrieve Phyre Job Id

Job DescriptionP06709
Confidence89.61%DateThu Jan 5 10:59:19 GMT 2012
Rank260Aligned Residues38
% Identity16%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.....
Predicted Secondary structure 








Query SS confidence 







































Query Sequence  VPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRD
Query Conservation      

  
  
   

  

  




 



 
  
  
Alig confidence 











..

























Template Conservation 

  

   
 
.. 
  


  
 

  

      
  
Template Sequence  RERQVLKLIDEG. . YTNHGISEKLHISIKTVETHRMNMMR
Template Known Secondary structure  TS..

ST
S
Template Predicted Secondary structure 


..




Template SS confidence 







































   16...20....... ..30.........40.........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions