Job Description P06709 Confidence 90.93% Date Thu Jan 5 10:59:19 GMT 2012 Rank 242 Aligned Residues 61 % Identity 15% Template c1xmaA_ PDB info PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulator; PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		M	K	D	N	T	V	P	L	K	L	I	A	L	L	A	N	G	E	F	H	S	G	E	Q	L	G	E	T	L	.	.	.	.	.	.	.	.	G	M	S	R	A	A	I	N	K	H	I	Q	T	L	R	D	W	G	V	D	V	F	T	V	P	.	.	.	.	.	G	K	G	Y	S	L	P	E
Query Conservation																															.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence																				.											.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																				.
Template Sequence		V	I	R	G	Y	V	D	T	I	I	L	S	L	L	I	E	G	D	.	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I	T	P
Template Known Secondary structure		S	G	G	G	T														.															T	T	S																		T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions