Job Description P06709 Confidence 60.97% Date Thu Jan 5 10:59:19 GMT 2012 Rank 384 Aligned Residues 56 % Identity 16% Template c1b34B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:protein (small nuclear ribonucleoprotein sm d2); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain Resolution 2.50 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		R	W	E	K	L	D	N	F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation																			.
Alig confidence																			.																													.
Template Conservation																																																.
Template Sequence		S	V	L	T	Q	S	V	K	N	N	T	Q	V	L	I	N	C	R	N	N	K	K	L	L	G	R	V	K	A	F	D	R	H	C	N	M	V	L	E	N	V	K	E	M	D	R	.	Y	I	S	K	M	F	L	R	G	D	S
Template Known Secondary structure											T								T	T	S												T	T														.									G	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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