Job Description P06709 Confidence 88.89% Date Thu Jan 5 10:59:19 GMT 2012 Rank 270 Aligned Residues 50 % Identity 16% Template c1b34A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain Resolution 2.50 Å

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		271	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure												.																							.	.	.	.
Query SS confidence												.																							.	.	.	.
Query Sequence		F	I	N	R	P	V	K	L	I	I	.	G	D	K	E	I	F	G	I	S	R	G	I	D	K	Q	G	A	L	L	L	E	Q	.	.	.	.	D	G	I	I	K	P	W	M	G	G	E	I	S	L	R	S	A	E
Query Conservation												.																							.	.	.	.
Alig confidence												.																							.	.	.	.
Template Conservation
Template Sequence		L	S	H	E	T	V	T	I	E	L	K	N	G	T	Q	V	H	G	T	I	T	G	V	D	V	S	M	N	T	H	L	K	A	V	K	M	T	L	K	N	R	E	P	V	Q	L	E	T	L	S	I	R	G	N	N
Template Known Secondary structure			T	T								T	T													T	T													T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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