Job Description P45470 Confidence 37.73% Date Thu Jan 5 12:02:47 GMT 2012 Rank 116 Aligned Residues 138 % Identity 12% Template c3hlyA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d. Resolution 2.40 Å

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		5	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		I	A	V	L	I	T	D	.	.	E	F	E	D	S	E	F	T	S	P	A	D	E	F	R	K	A	G	H	E	V	I	T	I	E	K	Q	A	G	K	T	V	K	G	K	K	G	E	A	S	V	T	I	D	K	S	I	D	E	V	T	P	A	E	F	D	A	L	L	L	P	G	G	H	S	P	D	Y	L	R	G
Query Conservation									.	.
Alig confidence									.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		V	L	I	G	Y	L	S	D	Y	G	Y	S	D	R	L	S	Q	A	I	G	R	G	L	V	K	T	G	V	A	V	E	X	V	D	L	R	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	E	L	I	E	A	V	S	S	A	R	G	I	V	L	G	T	P	P	S	.	Q	P	S	E	A
Template Known Secondary structure								T	T	S	T	T															T	T								T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.												S								B	S	.	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.															.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	R	F	V	T	F	T	R	D	F	V	N	S	G	K	P	V	F	A	I	C	H	G	P	Q	L	L	I	S	A	D	V	I	R	G	R	K	L	T	A	V	K	P	I	I	I	D	V	K	N	A	G	A	E	F	Y	D	Q	E	V	V	V	D	K	D	Q	L	V	T	S	R	T	P	D	D	L	P	A	F
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		V	A	T	A	L	S	T	I	F	A	A	A	H	N	K	Q	A	I	G	L	F	D	S	.	.	.	.	.	.	.	.	.	.	.	Y	G	G	D	D	E	P	I	D	A	L	L	A	Q	F	R	N	L	G	L	H	T	A	F	P	P	I	R	V	K	D	Q	P	.	.	T	E	A	I	Y	Q	Q	C	E	E	S
Template Known Secondary structure															T	T	S								.	.	.	.	.	.	.	.	.	.	.			S	S	B													T	T				S	S	S		B				S	S		.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350												.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.
		163	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	A	L	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	D	L	G	Q	W	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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