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Job DescriptionP45470
Confidence100.00%DateThu Jan 5 12:02:47 GMT 2012
Rank20Aligned Residues162
% Identity20%Templatec3f5dA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:protein ydea; PDBTitle: crystal structure of a protein of unknown function from2 bacillus subtilis
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.........50.........60.........70.........80.
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Query Sequence  KKIAVLITDEFEDSEFTSPADEF. RKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLR
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Template Sequence  KKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDP. . . IVSSIGGFKTSVDYIIGLEP. ANFNLLVXIGGDSWS. . N
Template Known Secondary structure 

SSB
TTTSTSTTSSS...BTTS

STTSS
.S

S

BS


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   4.....10.........20.........30.........40. ........50.........60. ........70...... .
 
   82.......90.........100.........110.........120.........130. ........140.........150.........
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Query Sequence  GDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDV. . KNAGAEFYDQEVVVDKDQLVTSRTPDDL
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Template Sequence  DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA. P
Template Known Secondary structure 

TT

TTTTTTTS
B

S
GGGGTT
TT


SS
B

SSTT
TT
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   78.80.........90.........100.........110.........120.........130.........140.........150..... .
 
   160.........170.
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Query Sequence  PAFNREALRLLG
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Template Sequence  IEFTNLILEXID
Template Known Secondary structure  TT
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   157..160........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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