Return to main results Retrieve Phyre Job Id

Job DescriptionP45470
Confidence98.56%DateThu Jan 5 12:02:47 GMT 2012
Rank33Aligned Residues94
% Identity24%Templatec3d54D_
PDB info PDB header:ligaseChain: D: PDB Molecule:phosphoribosylformylglycinamidine synthase 1; PDBTitle: stucture of purlqs from thermotoga maritima
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYL
Query Conservation 
 


 

   

   
       
   
  
   
               
              
 





      
Alig confidence 
















..




















......................

















Template Conservation    
 
 

   
     ..    

  

     
     ......................
   







      
Template Sequence  MKPRACVVVYPGSNCDR. . DAYHALEINGFEPSYVGLDDK. . . . . . . . . . . . . . . . . . . . . . LDDYELIILPGGFSYGDY
Template Known Secondary structure 




TT..TTT

TT

......................
SS
S

GGGG
Template Predicted Secondary structure 









..




......................










Template SS confidence 















































































   1........10....... ..20.........30........ .40.........50......
 
   81.... ....90.........100.........110.........
Predicted Secondary structure 


......












Query SS confidence 




. . . . . .

































Query Sequence  RGDNR. . . . . . FVTFTRDFVNSGKPVFAICHGPQLLISADVIRGR
Query Conservation       ......
   
         
  

 
   

 



 
 
Alig confidence 




......


















.













Template Conservation             
   
        





.


 
      
  
Template Sequence  LRPGAVAAREKIAFEIAKAAERGKLIMGIN. GFQILIEMGLLKGA
Template Known Secondary structure  SSTTTSTTT


.TSS
S
Template Predicted Secondary structure 








.







Template SS confidence 












































   57..60.........70.........80...... ...90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions