Job Description P45470 Confidence 21.30% Date Thu Jan 5 12:02:47 GMT 2012 Rank 148 Aligned Residues 130 % Identity 15% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.																																																				.	.
Query SS confidence										.																																																				.	.
Query Sequence		K	I	A	V	L	I	T	D	.	E	F	E	D	S	E	F	T	S	P	A	D	E	F	R	K	A	G	H	E	V	I	T	I	E	K	Q	A	G	K	T	V	K	G	K	K	G	E	A	S	V	T	I	D	K	S	I	D	E	V	T	.	.	P	A	E	F	D	A	L	L	L	P	G	G	H	S	P	D	Y	L
Query Conservation										.																																																				.	.
Alig confidence										.																																																				.	.																	.	.
Template Conservation																																																																																.	.
Template Sequence		N	I	L	V	L	F	Y	G	Y	G	S	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	S	P	T	R	Y	G	.	.
Template Known Secondary structure										S	S																	T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S									B	T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		R	G	D	N	R	F	V	T	F	T	R	D	F	V	N	.	.	.	.	.	.	.	S	G	K	P	V	F	A	I	C	H	G	P	Q	L	L	I	S	A	D	V	I	R	G	R	K	L	T	A	V	K	P	I	I	I	D	V	K	N	A	G	A	E	F	Y	D	Q	E
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		N	M	A	G	G	L	K	T	F	L	D	T	T	A	I	L	W	K	D	N	V	L	Y	G	K	P	V	T	F	F	T	E	A	S	T	V	.	.	.	.	.	.	.	H	G	G	H	E	T	T	I	L	T	M	S	T	Y	A	Y	H	F	G	M	I	I	V	P	I	G
Template Known Secondary structure		B											T	T					T	T	T	T	T	T	T									B	S	S	T	.	.	.	.	.	.	.	T	S	S	S	S							T							T							T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions