Job Description P45470 Confidence 29.10% Date Thu Jan 5 12:02:47 GMT 2012 Rank 125 Aligned Residues 154 % Identity 12% Template c2q62A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:arsh; PDBTitle: crystal structure of arsh from sinorhizobium meliloti Resolution 1.80 Å

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		1	.	.			.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure					.	.								.	.	.	.
Query SS confidence					.	.								.	.	.	.
Query Sequence		M	S	K	.	.	K	I	A	V	L	I	T	.	.	.	.	D	E	F	E	D	S	E	F	T	S	P	A	D	E	F	R	K	A	G	H	E	V	I	T	I	E	K	Q	A	G	K	T	V	K	G	K	K	G	E	A	S	V	T	I	D	K	S	I	D	E	V	T	P	A	E	F	D	A	L	L	L	P	G	G
Query Conservation					.	.								.	.	.	.
Alig confidence					.	.								.	.	.	.																																							.
Template Conservation																																																								.
Template Sequence		S	T	H	R	P	R	I	L	I	L	Y	G	S	L	R	T	V	S	Y	S	R	L	L	A	E	E	A	R	R	L	L	E	F	F	G	A	E	V	K	V	F	D	P	S	G	L	P	L	P	D	A	A	P	V	.	S	H	P	K	V	Q	E	L	R	E	L	S	I	W	S	E	G	Q	V	W	V	S	P	E	R
Template Known Secondary structure				S													S	S																	T	T									T	T				T	T	S	S		T	.	T	S														S									S
Template Predicted Secondary structure																																																								.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																																																				.
Query SS confidence																						.	.	.	.	.	.	.	.																																																				.
Query Sequence		H	S	P	D	Y	L	R	G	D	N	R	F	V	T	F	T	R	D	F	V	.	.	.	.	.	.	.	.	N	S	G	K	P	V	F	A	I	C	H	G	P	Q	L	L	I	S	A	D	V	I	R	G	R	K	L	T	A	V	K	P	I	I	I	D	V	K	N	A	G	A	E	F	Y	D	Q	E	V	V	V	.
Query Conservation																						.	.	.	.	.	.	.	.																																																				.
Alig confidence						.	.	.	.													.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																														.
Template Conservation						.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		H	G	A	M	.	.	.	.	T	G	I	M	K	A	Q	I	D	W	I	P	L	S	T	G	S	I	R	P	T	Q	G	K	T	L	A	V	M	Q	V	S	G	.	.	.	.	.	.	.	.	.	G	S	Q	S	F	N	A	V	N	Q	M	R	I	L	G	R	W	M	R	M	I	T	I	P	N	Q	S	S	V	A
Template Known Secondary structure		S	S	S		.	.	.	.										T	S		S		B	T	T	B		S	S	T	T										S	.	.	.	.	.	.	.	.	.	S	S																T	T					S						S
Template Predicted Secondary structure						.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
									146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	K	D	Q	L	V	T	S	R	T	P	D	D	L	P	A	F	N	R	E	A	L	R
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	F	Q	E	F	D	A	N	G	R	M	K	P	S	S	Y	Y	D	R	V	V	D	V	M	E	E	L	V	K
Template Known Secondary structure		S	G	G	G	G	B		T	T	S		B		S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions