Job Description P45470 Confidence 75.56% Date Thu Jan 5 12:02:47 GMT 2012 Rank 93 Aligned Residues 145 % Identity 15% Template c1ychD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.
Predicted Secondary structure												.	.																																																															.
Query SS confidence												.	.																																																															.
Query Sequence		M	S	K	K	I	A	V	L	I	T	.	.	D	E	F	E	D	S	E	F	T	S	P	A	D	E	F	R	K	A	G	H	E	V	I	T	I	E	K	Q	A	G	K	T	V	K	G	K	K	G	E	A	S	V	T	I	D	K	S	I	D	E	V	T	P	A	E	F	D	A	L	L	L	P	.	G	G	H	S	P
Query Conservation												.	.																																																															.
Alig confidence												.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	K	A	V	I	A	Y	D	T	M	W	L	S	T	E	K	M	A	H	A	L	M	D	G	L	V	A	G	G	C	E	V	K	L	F	K	L	S	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	N	D	V	I	K	E	I	L	D	A	R	A	V	L	V	G	S	P	T	I	N	N
Template Known Secondary structure				S									S	S	S																T	T								G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S									B	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.															.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	R	G	D	N	R	F	V	T	F	T	R	D	F	V	N	S	G	K	P	V	F	A	I	C	H	G	P	Q	L	L	I	S	A	D	V	I	R	G	R	K	L	T	A	V	K	P	I	I	I	D	V	K	N	A	G	A	E	F	Y	D	Q	E	V	V	V	D	K	D	Q	L	V	T	S	R	T	P	D
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		D	I	L	P	V	V	S	P	L	L	D	D	L	V	G	L	R	P	K	N	K	V	G	L	A	F	G	A	.	.	.	.	.	.	.	.	.	.	.	Y	G	W	G	G	G	A	Q	K	I	L	E	E	R	L	K	A	A	K	I	E	L	I	A	E	P	G	P	T	V	Q	W	V	P	.	R	G	E	D	L	Q
Template Known Secondary structure		B			G	G	G													S	S									.	.	.	.	.	.	.	.	.	.	.		S	S	S														T	T				S	S	S	S						S	S		.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.												.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	A	F	N	R	E	A	L	R	L	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	Y	E	L	G	R	K	I	A	A	R	I	A
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions