 |
Job Description | P45470 | Confidence | 97.30% | Date | Thu Jan 5 12:02:47 GMT 2012 |
Rank | 53 | Aligned Residues | 87 |
% Identity | 22% | Template | c1keeH_ |
PDB info |
PDB header:ligase | Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; |
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
|
Resolution | 2.10 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | K | I | A | V | L | I | T | D | E | F | E | D | S | E | F | T | S | P | A | D | E | F | R | K | A | G | H | E | V | I | T | I | E | K | Q | A | G | K | T | V | K | G | K | K | G | E | A | S | V | T | I | D | K | S | I | D | E | V | T | P | A | E | F | D | A | L | L | L | P | G | G | H | S | P | D | Y | L | R |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   | . |
|   |
| . | . | . | . |   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
| . | . |   |
Template Sequence |   |
P | F | H | V | V | A | Y | D | F | . |
G | A | K | . |
. |
. |
. |
R | N | I | L | R | M | L | V | D | R | G | C | R | L | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | A | Q | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | . |
. |
A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |
| S | . | S |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
| T | T |
|
|  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|
|
| S | B |
| S | . | . | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
| . |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | |
200 | . | . | |
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
. |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | N | R | F | V | T | F | T | R | D | F | V | N | S | G | K | P | V | F | A | I | C | H | G | P | Q | L | L | I | S | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|   |
|
Template Sequence |   |
P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D | I | P | V | F | G | I | L | . |
G | H | Q | L | L | A | L | A |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |
|
| . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
270 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|