 |
Job Description | P77376 | Confidence | 92.85% | Date | Thu Jan 5 12:28:19 GMT 2012 |
Rank | 499 | Aligned Residues | 121 |
% Identity | 15% | Template | d2nu7b1 |
SCOP info | Flavodoxin-like
| Succinyl-CoA synthetase domains
| Succinyl-CoA synthetase domains
|
Resolution | 2.20 |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
R | V | G | L | I | G | Y | G | Y | A | S | K | T | F | H | A | P | L | I | A | G | T | P | G | Q | E | L | A | V | I | S | S | S | D | E | T | K | V | K | A | D | W | P | T | V | T | V | V | S | E | P | K | H | L | F | N | D | P | N | I | D | L | I | V | I | P | T | P | . |
. |
. |
. |
. |
N | D | T | H | F | P | L |
Query Conservation |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
| . | . | . | . | . |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |   | . |
|   |   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
N | I | G | C | M | V | N | G | A | G | L | A | M | G | T | M | D | I | V | K | L | H | . |
G | G | E | P | A | N | F | L | D | V | G | G | G | A | T | K | E | R | V | T | . |
. |
. |
. |
. |
E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G |
Template Known Secondary structure |   |
S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|
| B |
|  |  |  |  |
|
| S |
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
  |   |
81 | . | . | . | . | . | |
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | A | A | L | E | . |
. |
. |
A | G | K | H | V | V | V | D | K | P | F | T | V | T | L | S | Q | A | R | E | L | D | A | L | A | K | S | L | G | R | V | L | S | V | F | H | N | R | R | W | D | S | D | F | L | T | L | K | G | L | L | A |
Query Conservation |   |
  |   |   |
|
|   | . | . | . |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   | . |   |   |
|
|   |   |   |   |   |   |   |   |   |
| . | . | . |   |   |   |
|
|
|
|
|   |   |
|   | . | . |   |
|   |
|
|   |   |   |   |   |   |
|   |
Template Sequence |   |
I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | . |
R | L | E | G | N | N | A | E | L | G | A | K | K | L | . |
. |
. |
A | D | S | G | L | N | I | I | A | A | K | G | . |
. |
L | T | D | A | A | Q | Q | V | V | A | A | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  | . |  |  |  | S | T | T |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
| S | S |  |  |  |
| S | S | . | . |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
|
|
. | . | . | . | . | . | . | . | 370 | . | . | . | |
|
. | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|