 |
Job Description | P77376 | Confidence | 96.69% | Date | Thu Jan 5 12:28:19 GMT 2012 |
Rank | 317 | Aligned Residues | 73 |
% Identity | 15% | Template | d2ldxa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.96 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | D | N | I | R | V | G | L | I | G | Y | G | Y | A | S | K | T | F | H | A | P | L | I | A | G | T | P | G | Q | E | L | A | V | I | S | S | S | D | E | T | K | V | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | W | P | T | V | T | V | V | S | E | P | K | H | L | F | N | D | P | N | I | D | L | I | V |
Query Conservation |   |
|   |   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|   |   |   | . |
|
|
|
|
|
|
|
|   |
|
|   |   | . |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
| . | . |
|
|
|
|
Template Sequence |   |
L | S | R | C | . |
K | I | T | V | V | G | V | G | D | V | G | M | A | . |
C | A | I | S | I | L | L | K | G | L | A | D | E | L | A | L | V | D | A | D | T | D | K | L | R | G | E | A | L | D | L | Q | H | G | S | L | F | L | S | T | P | K | I | V | F | G | K | D | Y | N | V | S | A | N | S | . |
. |
K | L | V | I |
Template Known Secondary structure |   |
|
|
|
| . |  |  |  |  |  |
|
| S |  |  |  |  |  | . |  |  |  |  |  |  | T | T | T | S |
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| S |
|
|  |  |  |  |  | S | S | G | G | G | G | T | T |  | . | . |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
| . |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|
|
| . | . |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
. | 90 | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | T | P | N | D | T | H |
Query Conservation |   |
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
I | T | A | G | A | R | M | V |
Template Known Secondary structure |   |
 |
|
| S |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|