 |
Job Description | P77376 | Confidence | 97.71% | Date | Thu Jan 5 12:28:19 GMT 2012 |
Rank | 194 | Aligned Residues | 101 |
% Identity | 13% | Template | d2d59a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| CoA-binding domain
|
Resolution | 1.65 |
|
 |
  |   |
6 | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | G | L | I | G | Y | . |
. |
. |
. |
G | Y | A | S | K | T | F | H | A | P | L | I | A | G | T | P | G | Q | E | L | A | V | I | S | S | S | D | E | T | K | V | K | A | D | W | P | T | V | T | V | V | S | E | P | K | H | L | F | N | D | P | N | I | D | L | I | V | I | P | T | P | N | D | T | H | F | P | L | A |
Query Conservation |   |
|
|   |
|
|
|   | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   | . |
|   |   |   |
|   |   |   | . |
|   |   |
|   |
|
|
|
|   |   | . | . | . | . | . |   |   |
|   |
|   |   |   |   |   |
|
|   |
|
| . | . |
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
K | I | A | L | V | G | A | S | P | K | P | E | R | D | A | N | I | . |
V | M | K | Y | L | L | E | H | . |
G | Y | D | V | Y | P | V | N | P | K | Y | . |
. |
. |
. |
. |
E | E | V | L | G | R | K | C | Y | P | S | V | L | D | I | . |
. |
P | D | K | I | E | V | V | D | L | F | V | K | P | K | L | T | M | E | Y | V |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|
| S |
| T | T | S |  |  |  |  | . |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  |
| T | T |
| . | . | . | . | . | S |  |  | T | T |  |  |
| B | S | S | G | G | G |
| . | . | S | S |
|
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |
|
|  |  |  |  |
|
|  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | A | L | E | A | G | K | H | V | V | V | D | K | P | F | T | V | T | L | S | Q | A | R | E | L | D | A | L | A | K | S | L | G | R | V | L | S |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   | . | . | . | . |
|
|   |   |   |   |
|   |   |   |
|
|   |
|
|
Template Sequence |   |
E | Q | A | I | K | K | G | A | K | V | V | W | F | Q | Y | N | T | Y | N | . |
. |
. |
. |
R | E | A | S | K | K | A | D | E | A | G | L | I | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  |
| T | T |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|