|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | |
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|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
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. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
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|
| . | . | . |  |  |  |  |  |  |
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|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
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|
|  |  |
|
|  |  |  |  |  |
|
|
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|
Query SS confidence |   |
|
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|
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|
| . |
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| . |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
N | I | R | V | G | L | I | G | Y | G | Y | A | S | K | T | . |
F | H | A | P | L | I | A | G | T | P | G | Q | . |
. |
. |
E | L | A | V | I | S | S | S | D | E | T | K | V | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | W | P | T | V | T | V | V | S | E | P | K | H | L | F | N | D | P | N | I | D |
Query Conservation |   |
  |
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|   |
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|   |
|   |   |   |   |   | . |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . |   |
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|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |
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|
Alig confidence |   |
|
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| . |
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| . | . | . |
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
|
Template Conservation |   |
  |
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|   |
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|   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |
|
| . | . |
|
Template Sequence |   |
S | V | K | I | G | I | I | G | A | G | S | A | V | F | S | L | R | L | V | S | D | L | C | K | T | P | G | L | S | G | S | T | V | T | . |
L | M | D | I | D | E | E | R | L | D | A | I | L | T | I | A | K | K | Y | V | E | E | V | G | A | D | L | K | F | E | K | T | M | N | L | D | D | V | I | I | D | A | . |
. |
D |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | T | T |
|  |  |  | . |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  | S |
|  |  |  |  |  | T | T |
| . | . | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|  |  |  |  |  |
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|
| . | . |
|
Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. |
  |
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
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|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
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|
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|
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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|
Query Sequence |   |
L | I | V | I | P | T | P | N | D | T | H | F | P | L | A | K | A | A | L | E | A | G | K | H | V | V | V | D | K | P | F | T | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | S | Q | A | R | E | L | D | A | L | A | K | S | L | G | . |
R | V | L | S | V | F | H | N | R | R | W | D | S | D | F |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
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|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|
|
|
| . |
|
|
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|
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|
|
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|
|
|
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|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|
|   |
|
Template Sequence |   |
F | V | I | N | T | A | M | V | G | G | H | T | Y | L | E | K | V | R | Q | I | G | E | K | Y | G | Y | Y | R | G | I | D | A | Q | E | F | N | M | V | S | D | Y | Y | T | F | S | N | Y | N | Q | L | K | Y | F | V | D | I | A | R | K | I | E | K | L | S | P | K | A | W | Y | L | Q | A | A | N | P | I | F | E | G | T |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
| T | T |
| B | T | T | B |
|
| T | T |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | K | G | L | L | A | E | G | V | L | G |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|
|
|
Template Sequence |   |
T | L | V | T | R | T | V | P | I | K | A | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| S |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |