Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 27 Aligned Residues 331 % Identity 20% Template c3v5nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of oxidoreductase from sinorhizobium meliloti Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																		.												.	.	.	.	.													.	.	.	.	.
Query SS confidence																																		.												.	.	.	.	.													.	.	.	.	.
Query Sequence		D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	.	I	S	S	S	D	E	T	K	V	K	A	.	.	.	.	.	D	W	P	T	V	T	V	V	S	E	P	K	.	.	.	.	.	H	L	F	N	D	P	N	I	D	L	I	V	I	P
Query Conservation																																		.												.	.	.	.	.													.	.	.	.	.
Alig confidence																																		.												.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	R	L	G	X	V	G	G	G	A	F	I	G	A	V	H	R	I	A	A	R	L	D	D	H	Y	E	L	V	A	G	A	L	S	S	T	P	E	K	A	E	A	S	G	R	E	L	G	L	D	P	S	R	V	Y	S	D	F	K	E	X	A	I	R	E	A	K	L	K	N	G	I	E	A	V	A	I	V
Template Known Secondary structure										S																T	S											S	S												T			G	G	G	B		S													T	T			S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	N	D	T	H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	N	H	V	H	Y	A	A	A	K	E	F	L	K	R	G	I	H	V	I	C	D	K	P	L	T	S	T	L	A	D	A	K	K	L	K	K	A	A	D	E	S	D	A	L	F	V	L	T	H	N	Y	T	G	Y	P	X	V	R	Q	A	R	E	X	I	E	N	G	D	I	G	A	V	R	L	V	Q	X	E
Template Known Secondary structure		S		T	T	S										T	T	T							S	S	S		S	S															S	S							G	G	G	G	S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.
Predicted Secondary structure																																									.																																.	.	.	.	.
Query SS confidence																																									.																																.	.	.	.	.
Query Sequence		F	D	R	F	R	P	Q	V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	.	.	.	.	.	R	V	I	L
Query Conservation																																									.																																.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																											.																																.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	Q	.	.	.	.	.	.	.	.	.	.	D	W	L	T	E	N	G	G	S	T	G	D	I	G	T	H	A	Y	N	L	G	C	F	V	S	G	L	E	L	E	E	L	A	A	D	L	D	S	F	V	G	G	R	Q	L	D	D	N	A	H	V	L	X	R	F	R	E	K	D	G	T	R	A	K	G	X	L
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.		T	T	S									T																											S	T	T			S													B	T	T	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		H	G	T	M	L	A	A	A	E	S	A	R	.	.	Y	I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y
Query Conservation														.	.
Alig confidence														.	.																												.
Template Conservation																																											.
Template Sequence		W	C	S	Q	V	A	P	G	H	E	N	G	L	X	V	R	V	Y	G	T	K	G	G	L	E	W	T	Q	K	D	P	N	Y	L	W	Y	T	P	F	G	E	.	P	K	R	L	L	T	R	A	G	A	G	A	S	P	A	A	A	R	V	S	R	I	P	S	G	H	P	E	G	Y	L	E	G	F	A	N	I	Y
Template Known Secondary structure					S			T	T		S	S									S	S							T	T	S	T	T							T	T	S	.							T	T	S	T	T							T	T			S		T	T	S
Template Predicted Secondary structure																																											.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		304	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.
Predicted Secondary structure												.	.	.	.																											.
Query SS confidence												.	.	.	.																											.
Query Sequence		A	A	I	R	D	A	L	N	G	D	.	.	.	.	G	E	N	P	V	P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	.	R	A	T	L	C
Query Conservation												.	.	.	.																											.
Alig confidence												.	.	.	.																											.
Template Conservation
Template Sequence		S	E	A	A	R	A	I	Y	A	K	R	A	D	P	S	V	I	Y	P	T	I	D	D	G	X	R	G	X	T	F	V	D	A	C	V	R	S	S	E	R	N	G	A	W	I	K
Template Known Secondary structure										T	T				T	T																									T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions