Job Description P77376 Confidence 95.70% Date Thu Jan 5 12:28:19 GMT 2012 Rank 408 Aligned Residues 120 % Identity 15% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.
Predicted Secondary structure																																																		.	.																												.	.
Query SS confidence																																																		.	.																												.	.
Query Sequence		R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	T	V	V	.	.	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	.	.	A
Query Conservation																																																		.	.																												.	.
Alig confidence															.									.																										.	.											.	.																.	.
Template Conservation															.									.																																						.	.
Template Sequence		P	V	V	V	V	G	A	G	G	A	A	R	A	.	V	I	Y	A	L	L	Q	M	.	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	.	.	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V
Template Known Secondary structure		S							S						.								T	.	T									S							T			S	S						G	G	G							T		.	.	S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure															.									.																																						.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	.	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K
Query Conservation																																						.
Alig confidence															.	.						.	.	.														.
Template Conservation															.	.						.	.	.
Template Sequence		S	D	D	S	L	K	N	L	S	L	V	Y	D	.	.	V	I	Y	F	D	.	.	.	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K	G	N	L	M	F	Y	Y	Q	A	M	E	N	L	K
Template Known Secondary structure							T	T		S					.	.		S	S	S		.	.	.											T		S					T
Template Predicted Secondary structure															.	.						.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions