Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 42 Aligned Residues 282 % Identity 20% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure										.																																	.																		.	.	.	.	.	.	.	.
Query SS confidence										.																																	.																		.	.	.	.	.	.	.	.
Query Sequence		I	R	V	G	L	I	G	Y	.	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	.	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	.	.	.	.	.	.	.	.	D	P	N	I	D	L	I	V	I	P	T	P	N
Query Conservation										.																																	.																		.	.	.	.	.	.	.	.
Alig confidence										.							.																										.																		.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		T	R	F	A	L	T	G	L	A	G	Y	I	A	P	R	.	H	L	K	A	I	K	E	V	G	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	F	F	T	E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A	S	P	N
Template Known Secondary structure									T	T	S	S	S				.								T	T									S	S				G	G	G	G	G	T		T	T					S															T	T				S						S		G
Template Predicted Secondary structure																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	H	Y	P	Q	I	R	M	A	L	R	L	G	A	N	A	L	S	E	K	P	L	V	L	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V	L	Q	L	R	V	H	P	S	L	L	A	L	K	E	R	L	G	Q	E	K	G	A	K	D	V	V	L	T	Y	V	T	G	R
Template Known Secondary structure		G	G											T	T							S	S	S		S																T								G	G	G	G													T			S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	P	Q	V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	R	V	I	L	H	G	T	M	L	A	A	A	E
Query Conservation
Alig confidence		.																																													.	.	.	.	.	.	.
Template Conservation		.																																													.	.	.	.	.	.	.
Template Sequence		.	G	K	W	Y	G	K	S	W	K	V	D	E	A	K	S	G	G	L	A	T	N	I	G	I	H	F	F	D	L	L	A	W	L	F	G	R	A	L	H	V	E	V	H	A	.	.	.	.	.	.	.	R	T	P	T	V	N	A	G	Y	L	E	L	E	G	A	R	V	R	W	F	L	S	I	D	P	S	F	V
Template Known Secondary structure		.		G	G	G	G	G	S	G	G	G												T	T																						.	.	.	.	.	.	.			S	S									T	T											G	G	G	S
Template Predicted Secondary structure		.																																													.	.	.	.	.	.	.
Template SS confidence
			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	R	Y	I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D	G
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	P	L	R	R	Q	G	K	R	T	Y	R	S	I	A	V	D	G	E	E	V	E	F	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	D	L	H	T	E	V	Y	R	K	T	L	A	G	E
Template Known Secondary structure								T	T										T	T						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																																						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	P	V	P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		G	F	.	.	G	L	D	E	A	A	E	A	I	R	V	A	A	L	L	R
Template Known Secondary structure				.	.
Template Predicted Secondary structure				.	.
Template SS confidence
		276	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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