Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 28 Aligned Residues 315 % Identity 18% Template c3nt5B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase; PDBTitle: crystal structure of myo-inositol dehydrogenase from bacillus subtilis2 with bound cofactor and product inosose Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.					.
Query SS confidence																																											.	.	.					.
Query Sequence		N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	.	.	.	A	D	W	P	.	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P
Query Conservation																																											.	.	.					.
Alig confidence																																											.	.	.					.
Template Conservation
Template Sequence		S	L	R	I	G	V	I	G	T	G	A	I	G	K	E	H	I	N	R	I	T	N	K	L	S	G	A	E	I	V	A	V	T	D	V	N	Q	E	A	A	Q	K	V	V	E	Q	Y	Q	L	N	A	T	V	Y	P	N	D	D	S	L	L	A	D	E	N	V	D	A	V	L	V	T	S	W	G	P	A	H	E	S
Template Known Secondary structure											S													T	S	S	S									S	S											T	T							S	S								S	S								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	.	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P	Q
Query Conservation																																										.
Alig confidence																																										.																																				.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		S	V	L	K	A	I	K	A	Q	K	Y	V	F	C	E	K	P	L	A	T	T	A	E	G	C	M	R	I	V	E	E	E	I	K	V	G	K	R	L	V	Q	V	G	F	M	R	R	Y	D	S	G	Y	V	Q	L	K	E	A	L	D	N	H	V	I	G	E	P	L	M	I	H	C	A	H	R	N	.	.	.	.
Template Known Secondary structure									T	T							S		S		S	S														T	S	S								G	G	G	G	S												T	T	T	T		S											.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																		.													.	.
Query SS confidence																																		.													.	.
Query Sequence		V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	.	.	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	R	V	I	L	H	G	T	M	L	A	A	A	E	S
Query Conservation																																		.													.	.
Alig confidence		.	.	.																														.													.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	T	V	G	D	N	Y	T	T	D	M	A	V	V	D	T	L	V	H	E	I	D	V	L	H	W	L	V	N	D	D	Y	E	S	V	Q	V	I	Y	P	K	K	S	K	N	A	L	P	H	L	K	D	P	Q	I	V	V	I	E	T	K	G	G	I	V	I	N	A	E	I	Y	V	N	C	K	Y	G
Template Known Secondary structure		.	.	.	S				T	T			T	T					T	T	T												T												S			T	T	S		T	T	S			S								S	S	S									T	T		S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		236	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	R	.	.	Y	I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D
Query Conservation				.	.
Alig confidence				.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	I	Q	C	E	I	V	G	E	D	G	I	I	K	L	P	E	P	S	S	I	S	L	R	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	S	T	D	I	L	M	D	W	Q	R	R	F	V	A	A	Y	D	V	E	I	Q	D	F	I	D	S	I	Q	K	K
Template Known Secondary structure											S	S																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		314	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	E	.	N	P	V	P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	R	A	T	L	C	L
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		G	E	V	S	G	P	T	A	W	D	G	Y	I	A	A	V	T	T	D	A	C	V	K	A	Q	E	S	G	Q	K	E	K	V
Template Known Secondary structure		S	S			S	S																							S			B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions