Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 29 Aligned Residues 330 % Identity 15% Template c3m2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		M	S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	.	.	.	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H
Query Conservation																																														.	.	.
Alig confidence					.																																									.	.	.
Template Conservation					.
Template Sequence		L	S	L	.	I	K	V	G	L	V	G	I	G	A	Q	X	Q	E	N	L	L	P	S	L	L	Q	X	Q	D	I	R	I	V	A	A	C	D	S	D	L	E	R	A	R	R	V	H	R	F	I	S	D	I	P	V	L	D	N	V	P	A	X	L	N	Q	V	P	L	D	A	V	V	X	A	G	P	P	Q	L	H
Template Known Secondary structure					.									S						T							T		T	T									S	S					G	G	G	G	G	T	S		S					S	S								S			S						S
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	X	G	L	L	A	X	S	K	G	V	N	V	F	V	E	K	P	P	C	A	T	L	E	E	L	E	T	L	I	D	A	A	R	R	S	D	V	V	S	G	V	G	X	N	F	K	F	A	R	P	V	R	Q	L	R	E	X	T	Q	V	D	E	F	G	E	T	L	H	I	Q	L	N	H	Y	A	N	K	P
Template Known Secondary structure											T	T							S		S		S	S															T																							T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.																																.
Query SS confidence																																			.																																.
Query Sequence		Q	V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	.	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	.	R	V	I	L	H	G	T	M	L	A	A	A	E	S
Query Conservation																																			.																																.
Alig confidence		.	.																																.															.	.	.	.														.
Template Conservation		.	.																																															.	.	.	.
Template Sequence		.	.	R	A	P	L	W	G	L	D	S	T	L	R	S	F	L	L	A	Q	A	I	H	T	I	D	L	A	I	T	F	G	D	G	E	L	R	R	V	Q	S	S	V	Q	R	H	D	D	.	.	.	.	A	L	I	V	R	A	D	X	A	F	S	S	G	A	T	A	S	L	L	A	G	T	S	F	P	Y	F	E
Template Known Secondary structure		.	.	S	S			T	T		S										T														S													T	T	.	.	.	.											T	T	S									S		S	S	S
Template Predicted Secondary structure		.	.																																															.	.	.	.
Template SS confidence
				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Y	I	V	H	G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D	G	E
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		F	D	X	K	L	V	S	S	S	S	T	L	V	E	L	D	N	L	W	N	I	T	L	H	E	P	E	H	A	T	R	P	T	G	A	A	K	.	.	.	.	.	.	.	R	W	R	G	A	W	Q	P	G	P	L	D	S	G	Y	E	R	S	G	Y	H	G	E	L	H	Q	F	F	Q	A	I	R	E	H	R	R
Template Known Secondary structure									T	T	S							T	T	T							T	T			B	T	T	T	B	S		T	.	.	.	.	.	.	.	T									T	T			S	S	T	T	T	S														T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	V	P	A	S	Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	R	A	T	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	A	D	F	A	S	L	L	P	T	Y	R	V	I	E	E	I	C	S	A	D	A	V	A	Q	G	L	Q
Template Known Secondary structure			T	T	S	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions