Job Description P77376 Confidence 100.00% Date Thu Jan 5 12:28:19 GMT 2012 Rank 1 Aligned Residues 342 % Identity 70% Template c3kuxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the ypo2259 putative oxidoreductase from yersinia pestis Resolution 2.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	E	T	K	V	K	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	K	I	K	V	G	L	L	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	X	G	T	P	G	L	E	L	A	G	V	S	S	S	D	A	S	K	V	H	A	D	W	P	A	I	P	V	V	S	D	P	Q	X	L	F	N	D	P	S	I	D	L	I	V	I	P	T	P	N	D	T	H	F	P	L	A
Template Known Secondary structure		T											S						T							T	S	T	T									S							T	T		S	S					S									S	S								S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F	R	P	Q	V	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	A	L	A	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	N	A	L	K	E	H	A	D	D	A	G	L	L	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	T	L	L	A	E	G	S	L	G	N	V	V	Y	F	E	S	H	F	D	R	Y	R	P	E	I	R	Q
Template Known Secondary structure							T	T							S	S			S															T	T								G	G	G	G														T	T	T		S											B			S	S		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F	G	L	P	V	S	M	T	V	D	L	A	Q	L	R	P	G	A	Q	S	T	D	Y	F	H	A	I	L	S	Y	P	Q	R	R	V	I	L	H	G	T	M	L	A	A	A	E	S	A	R	Y	I	V	H
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		R	W	R	.	.	.	E	Q	G	G	G	I	W	Y	D	L	G	P	H	L	L	D	Q	A	L	Q	L	F	G	L	P	E	T	L	N	V	D	L	G	X	L	R	P	G	S	Q	S	V	D	Y	F	H	A	V	L	S	Y	P	G	Q	R	V	V	L	H	S	T	V	L	A	A	A	E	T	A	R	Y	I	V	H
Template Known Secondary structure		S		S	.	.	.				B																						S										S	T	T			S	B										T	T									S	B			S				S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		162	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	G	S	Y	V	K	Y	G	L	D	P	Q	E	E	R	L	K	N	G	E	R	L	P	Q	E	D	W	G	Y	D	M	R	D	G	V	L	T	R	V	E	G	E	E	R	V	E	E	T	L	L	T	V	P	G	N	Y	P	A	Y	Y	A	A	I	R	D	A	L	N	G	D	G	E	N	P	V	P	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	Q	G	S	Y	I	K	F	G	V	D	P	Q	E	D	R	L	K	A	G	E	R	L	P	Q	A	D	W	G	Y	D	X	R	D	G	I	V	T	L	S	H	D	N	V	L	T	E	K	P	L	L	T	L	P	G	N	Y	P	A	Y	Y	A	G	I	R	D	A	I	W	G	T	A	P	N	P	V	P	A	T
Template Known Secondary structure			S	S							S			S							T	T			S			T	T	T	T												S	S	S														T												T	T	S	S			S	S	B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	Q	V	M	E	L	I	E	L	G	I	E	S	A	K	H	R	A	T	L	C	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I	K	V	X	E	L	I	E	L	G	I	A	S	D	Q	Q	K	K	A	L	P	I	I
Template Known Secondary structure																				T	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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