Job Description P77376 Confidence 98.53% Date Thu Jan 5 12:28:19 GMT 2012 Rank 99 Aligned Residues 146 % Identity 17% Template c3ingA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40														.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	.	.	.	.	P	G	Q	E	L	A	V	I	S	S	S	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	V	K	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I
Query Conservation																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		K	E	I	R	I	I	L	X	G	T	G	N	V	G	L	N	.	V	L	R	I	I	D	A	S	N	R	R	R	F	S	I	K	V	V	G	V	S	D	S	R	S	Y	A	S	G	R	N	L	D	I	S	S	I	I	S	N	K	E	K	T	G	R	I	S	D	R	A	F	S	G	P	E	D	L	X	G	E	A	A
Template Known Secondary structure												S						.																							S	S	B					S	S														S		S		S	S	B			S	G	G	G	G	T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		66	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure												.	.	.	.																																									.
Query SS confidence												.	.	.	.																																									.
Query Sequence		D	L	I	V	I	P	T	P	N	D	.	.	.	.	T	H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	R	E	L	D	A	L	A	K	S	L	G	.	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G
Query Conservation												.	.	.	.																																									.
Alig confidence												.	.	.	.																						.																			.																							.
Template Conservation																																					.																																										.
Template Sequence		D	L	L	V	D	C	T	P	A	S	R	D	G	V	R	E	Y	S	L	Y	R	X	A	F	E	S	G	X	N	V	V	T	A	N	K	.	S	G	L	A	N	K	W	H	D	I	X	D	S	A	N	Q	N	S	K	Y	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	V	L	D	Y	S	I	.	L	P
Template Known Secondary structure		S										S	S	S													T	T									.																		T						G	G	G	S	S	T	T	S									T		.	T	T
Template Predicted Secondary structure																																					.																																										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160
		141	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	E	V	A	Y	F	E	S	H	F	D
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		S	.	.	K	V	K	R	F	R	G	I	V	S
Template Known Secondary structure			.	.
Template Predicted Secondary structure			.	.
Template SS confidence
		161			.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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