Job Description P77376 Confidence 99.15% Date Thu Jan 5 12:28:19 GMT 2012 Rank 78 Aligned Residues 177 % Identity 15% Template c3hdjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable ornithine cyclodeaminase; PDBTitle: the crystal structure of probable ornithine cyclodeaminase from2 bordetella pertussis tohama i Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		S	D	N	I	R	V	G	L	I	G	Y	G	Y	A	S	K	T	F	H	A	P	L	I	A	G	T	P	G	Q	E	L	A	V	I	S	S	S	D	.	.	.	.	.	E	T	K	V	K	A	D	W	P	T	V	T	V	V	S	E	P	K	H	L	F	N	D	P	N	I	D	L	I	V	I	P	T	P	N	D	T
Query Conservation																																								.	.	.	.	.
Alig confidence																			.																					.	.	.	.	.																									.	.
Template Conservation																			.																																																		.	.
Template Sequence		P	R	S	S	V	L	G	L	F	G	A	G	T	Q	G	A	E	.	H	A	A	Q	L	S	A	R	F	A	L	E	A	I	L	V	H	D	P	Y	A	S	P	E	I	L	E	R	I	G	R	R	C	G	V	P	A	R	X	A	A	P	A	D	I	A	A	Q	A	.	.	D	I	V	V	T	A	T	R	S	T	T
Template Known Secondary structure		T	T										S						.									S										T	T														T	S															.	.	S									S	S
Template Predicted Secondary structure																			.																																																		.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		H	F	P	L	A	K	A	A	L	E	A	G	K	H	V	V	V	D	K	P	F	T	V	T	L	S	Q	A	.	R	E	L	D	A	L	A	K	S	L	G	R	V	L	S	V	F	H	N	R	R	W	D	S	D	F	L	T	L	K	G	L	L	A	E	G	V	L	G	E	V	A	Y	F	E	S	H	F	D	R	F
Query Conservation																														.
Alig confidence				.																										.
Template Conservation				.
Template Sequence		P	L	.	F	A	G	Q	A	L	R	A	G	A	F	V	G	A	I	G	S	S	L	P	H	T	R	E	L	D	D	E	A	L	R	R	A	R	A	V	V	V	E	W	R	E	Q	T	L	S	E	A	G	D	L	V	L	A	A	P	D	T	G	L	D	A	K	V	V	E	L	A	D	V	L	A	G	R	A	A	A
Template Known Secondary structure			S	.	S		G	G	G			T	T									S	S	T	T													S					S																	G	G	G														T	T
Template Predicted Secondary structure				.
Template SS confidence
		193	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Q	V	R	D	R	W	R	E	Q	G	G	P	G	S	G	I	W	Y	D	L	A	P	H	L	L	D	Q	A	I	T	L	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		R	Q	A	D	E	D	I	V	I	Y	K	.	.	.	.	.	.	.	S	V	G	V	G	L	E	D	V	A	L	A	G	Y	A	Y
Template Known Secondary structure				S	T	T							.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.								.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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