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Job DescriptionP77376
Confidence100.00%DateThu Jan 5 12:28:19 GMT 2012
Rank2Aligned Residues344
% Identity38%Templatec3gfgB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:uncharacterized oxidoreductase yvaa; PDBTitle: structure of putative oxidoreductase yvaa from bacillus subtilis in2 triclinic form
Resolution2.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSDNIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPL
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Template Sequence  VDT. IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEH
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   11.. ......20.........30.........40.........50.........60.........70.........80.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
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Template Sequence  TMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINTYQVSYNRYRPEVQ
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GGGGSTTSS
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
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Template Sequence  ARWREKEGTATGTLYDLGSHIIDQTLHLFGMPKAVTANVMAQRENAETVDYFHLTLDYGKLQAILYGGSIVPANGPRYQI
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SSS
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   241........250.........260.........270........ .280.........290.........300.........310........
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Query Sequence  HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGV. . LTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPV
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Template Sequence  HGKDSSFIKYGIDGQEDALRAGRKPEDDSWGADVPEFYGKLTTIRGSDKKTETIPSVNGSYLTYYRKIAESIREGAALPV
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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   319320.........330.........340.....
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Query Sequence  PASQAIQVMELIELGIESAKHRATLCL
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Template Sequence  TAEEGINVIRIIEAAMESSKEKRTIML
Template Known Secondary structure 
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   330.........340.........350......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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