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Job DescriptionP77376
Confidence100.00%DateThu Jan 5 12:28:19 GMT 2012
Rank17Aligned Residues320
% Identity21%Templatec3ezyB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of probable dehydrogenase tm_0414 from2 thermotoga maritima
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVK. . . ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLA
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Template Sequence  LRIGVIGLGRIGTI. HAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV
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S.GGG
TT

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Query Sequence  KAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVRD
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Template Sequence  IACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRD. . . . PAP
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Query Sequence  RWREQGGPGSGIWYDLAPHLLDQAITLFG. LPVSMTVDLAQLRP. . . . GAQSTDYFHAILSYPQRRVILHGTMLAAAES.
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Template Sequence  PPLDYIRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGY
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S

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   236...240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  . ARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDG
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Template Sequence  DQRIEVFGSKGRIFADNVRETTVVLTDEQGDR. . . . . . . . . . . . . . . . . GSRYLYFFLERYRDSYLEELKTFIKNVKSGE
Template Known Secondary structure  TT


BS
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   236...240.........250.........260....... ..270.........280.........290........
 
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Query Sequence  ENPVPASQAIQVMELIELGIESAKHRATLCLA
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Template Sequence  PPAVSGEDGKMALLLGYAAKKSLEEKRSVKLE
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SSBTS
GG
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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